SAN FRANCISCO, April 9 — A US judge yesterday halted the Trump administration’s policy of sending some asylum seekers back across the southern border to wait out their cases in Mexico, stopping a programme the government planned to use to stem a recent flood of migrants.

The ruling is slated to take effect on Friday, according to the order by US District Judge Richard Seeborg in San Francisco. The preliminary injunction will apply nationwide.

The programme was launched in January and was one of many policies aimed at slowing rising numbers of immigrants arriving at the border, many of them families from Central America, that swelled last month to the highest level in a decade.

Because of limits on how long children are legally allowed to be held in detention, many of the families are released to await US immigration court hearings, a process that can take years because of ballooning backlogs.

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The Trump administration said last week it planned to expand the program of sending some migrants to wait out their US court dates in Mexican border cities, under a policy known as Migrant Protection Protocols, or MPP.

The government argued MPP was needed because so many asylum seekers spend years living in the United States and never appear for their court hearings before their claim is denied and an immigration judge orders them to be deported.

However, Seeborg said that the Immigration and Nationalisation Act does not authorise the government to return asylum seekers to Mexico the way the government has applied it. He also said the policy lacks safeguards to protect refugees from threats to their life or freedom.

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A US Department of Justice spokesman declined to comment. The White House did not immediately respond to a request for comment.

The judge said the government shall permit the 11 plaintiffs in the case to enter the United States beginning on Sunday. He said the government still retained the right to detain the asylum-seekers pending the outcome of their case.

The ruling can be appealed, and the government could seek a stay of the injunction until the appeals process runs its course.

“This is a great ruling,” said Judy Rabinovitz, a lawyer with the American Civil Liberties Union, which was one of the groups that brought the case.

“This is what they were planning on implementing on a large scale. That would have been a complete game changer in the way our asylum system works,” she said.

Rabinovitz said the groups that brought the lawsuit needed to discuss what could be done for the hundreds of refugees who are awaiting their cases in Mexico. She said as their cases are heard, they will be returned to the United States, but that could take months.

The plaintiffs include legal service organisations and migrants who fled Guatemala, Honduras and El Salvador to escape what they said was extreme violence, rape and death threats.

Gabriela Orellana, 26, an asylum seeker from El Salvador who was scheduled to have her first hearing today, was delighted by the news of the judge’s ruling.

“I’m crying from happiness,” she told Reuters. She is not one of the plaintiffs in the case.

Orellana said she fled El Salvador with her eight-year-old daughter and six-year-old son after she was shot by a gang member. She has been in Tijuana since January and has waited nearly two months for her first interview with US immigration authorities.

MPP was based on a decades-old law that says migrants who enter from a contiguous country can be returned there to wait out their deportation case, although the provision had never been used in the way the administration has applied it.

Civil rights groups sued, arguing the policy violated US and international law by returning refugees to dangerous border towns where they would be unable to get legal counsel or notices of hearings.

Apprehensions by border agents were on track to top 100,000 in March, the highest level in a decade, according to the US Customs and Border Protection.

While illegal border crossings were higher in the early 2000s, most of those apprehended at that time were single men, often from Mexico.

Kirstjen Nielsen resigned as Secretary of Homeland Security, the department that oversees immigration, on Sunday to be replaced temporarily by Kevin McAleenan, presently commissioner of US Customs and Border Protection.

A congressional official familiar with the matter said some in Congress believe Trump forced out Nielsen in part because she was trying to obey laws on treatment of refugees, granting of amnesty and separation of families. — Reuters